Download PanGEA-BlastN

PanGEA-BlastN is platform independent and works in Windows, Linux and Mac OsX. It should actually work on all platforms supported by the Mono-project

Run PanGEA-BlastN in Windows:

1.) Download PanGEA-BlastN.rar

2.) Unpack PanGEA-BlastN.rar in any folder (make sure that all files are in this folder: PanGEA-BlastN.exe, PanCom.dll, Bioinformatic.dll)

3.) Install the Microsoft .net Framework 2.0 or higher (.net Framework)

4.) Open the console and type the command, for example:
"PanGEA-BlastN -d genes.fasta -i ests.fasta -normalsw"

Tip: use .bat files

Run PanGEA-BlastN in Linux, Mac OsX:

1.) Download PanGEA-BlastN.rar

2.) Unpack PanGEA-BlastN.rar in any folder (make sure that all files are in this folder: PanGEA-BlastN.exe, PanCom.dll, Bioinformatic.dll)

3.) Install the latest version of the Mono software (Mono)

4) Open the console and type the command, for example:
"mono PanGEA-BlastN.exe -d genes.fasta -i ests.fasta -normalsw"

Tip: use shell scripts, for example:
#!/bin/sh
exec /usr/bin/mono PanGEA-BlastN.exe -d genes.fasta -i ests.fasta -normalsw -o output.aln